Daisuke Hira
Publication／論文・著書
◆論文◆
43) Oka, T., Okuno, A., Hira, D., Teramoto, T., Chihara, Y., Hirata, R., Kadooka, C., Kakuta, Y. Substrate binding and catalytic mechanism of UDP-α-D-galactofuranose: β-galactofuranoside β-(1→5)-galactofuranosyltransferase GfsA, PNAS Nexus, 2024;, pgae482, doi: 10.1093/pnasnexus/pgae482
42) Suenaga, H., Hira, T., Yoshimura, T., Oka, T., Hira, D. Selection and application of methanol-utilizing bacteria from tomato leaves for biocontrol of gray mold. Front. Microbiol. 2024 15:1455699. doi: 10.3389/fmicb.2024.1455699
41) Kumamoto, S., Yamamoto, A., Shiratsuchi, Y., Matsuo, K., Higashiura, A., Hira, D. Structural investigations of cargo molecules inside icosahedrally symmetric encapsulin by VUVCD spectroscopic measurements. Chirality. 2024 doi: 10.1002/chir.23700.
40) Kadooka C, Tanaka Y, Hira D, Oka T. Identification of a putative α-galactoside β-(1 → 3)-galactosyltransferase involved in the biosynthesis of galactomannan side chain of glucuronoxylomannogalactan in Cryptococcus neoformans. Front. Microbiol. 2024 May 22;15:1390371. doi: 10.3389/fmicb.2024.1390371.
39) Kadooka, C., Tanaka, Y., Kishida, R., Hira, D., Oka, T. Discovery of α-(1→6)-linked mannan structures resembling yeast N-glycan outer chains in Aspergillus fumigatus mycelium. mSphere. 2024 May 29;9(5):e0010024. doi: 10.1128/msphere.00100-24.
38) Kubo Y, Tanizaki Y, Hira D, Nakayama Y, Kadooka C, Oka T. Complete genome sequence of Bacillus subtilis subsp. natto NARUSE using PacBio sequencing. Microbiol. Resour. Announc. 2023 Nov 20:e0057823. doi: 10.1128/MRA.00578-23.
37) Kadooka C, Tanaka Y, Hira D, Maruyama JI, Goto M, Oka T. Identification of galactofuranose antigens such as galactomannoproteins and fungal-type galactomannan from the yellow koji fungus (Aspergillus oryzae). Front. Microbiol. 2023 Feb 6;14:1110996. doi: 10.3389/fmicb.2023.1110996.
36) Kadooka, C., Hira, D., Tanaka, Y., Miyazawa, K., Bise, M., Takatsuka, S., Oka, T., Identification of an α-(1→6)-mannosyltransferase contributing to biosynthesis of the fungal-type galactomannan α-core-mannan structure in Aspergillus fumigatus, mSphere, 2022, Dec 21;7(6):e0048422. doi: 10.1128/msphere.00484-22.
35) Kadooka, C., Hira, D., Tanaka, Y., Chihara, Y., Goto, M., Oka, T., Mnt1, an α-(1 → 2)-mannosyltransferase responsible for the elongation of N-glycans and O-glycans in Aspergillus fumigatus, Glycobiology, 2022, cwac049, doi: 10.1093/glycob/cwac049
34) Hira, D., Onoue, T., Oka, T., Structural basis for the core-mannan biosynthesis of cell wall
fungal-type galactomannan in Aspergillus fumigatus. The Journal of Biological Chemistry, vol. 295, pp.15407-15417, 2020, doi: 10.1074/jbc.RA120.013742.
33) Yamamoto, Y., Yamamoto, Y., Saita, T., Hira, D., Chijiwa, T., Shin, M., Immunohistochemical Pharmacokinetics of the Anti-diabetes Drug Alogliptin in Rat Kidney and Liver. Acta Histochemica et Cytochemica, vol. 53, pp.55-60, 2020, doi: 10.1267/ahc.19036
32) Hira, D., Matsumura, M., Kitamura, R., Furukawa, K., Fujii, T., Unique hexameric structure of copper-containing nitrite reductase of an anammox bacterium KSU-1. Biochemical and Biophysical Research Communications, vol.526, pp.654-660, 2020, doi: 10.1016/j.bbrc.2020.03.144
31) Kobayashi, S., Hira, D., Yoshida, K., Toyofuku, M., Shida, Y., Ogasawara, W., Yamaguchi, T., Araki, N. and Oshiki, M., Nitric oxide production from nitrite reduction and hydroxylamine oxidation by copper-containing dissimilatory nitrite reductase (NirK) from the aerobic ammonia-oxidizing archaeon, Nitrososphaera viennensis. Microbes Environ. vol.33, pp. 428-434, 2018, https://doi.org/10.1264/jsme2.ME18058
30) Hira, D., Kitamura, R., Nakamura, T., Yamagata, Y., Furukawa, K., Fujii, T., Anammox Organism KSU-1 Expresses a Novel His/DOPA Ligated Cytochrome c. Journal of Molecular Biology, vol.430, pp.1189-1200, 2018, doi: 10.1016/j.jmb.2018.02.017
※Front cover に採用 (https://www.journals.elsevier.com/journal-of-molecular-biology/covers-gallery/cover-of-volume-430-issue-21)
29) Hira, D., Aiko, N., Yabuki, Y., Fujii, T., Impact of aerobic acclimation on the nitrification performance and microbial community of landfill leachate sludge. Journal of Environmental Management, vol.209, pp.188-194, 2018, doi: 10.1016/j.jenvman.2017.12.056
28) 相子伸之, 中西博隆, 平大輔, 塩分濃度が海面埋立管理型廃棄物処分場調整池底泥の硝化作用に及ぼす影響, 日本水処理生物学会誌, vol.53, No.4, pp.129-137,2017, doi: 10.2521/jswtb.53.129
27) Ren, LF., Liang, S., Ngo, H.H., Guo, W., Ni, SQ., Liu, C., Zhao, Y.K., Hira, D., Enhancement of anammox performance in a novel non-woven fabric membrane bioreactor (nMBR), RSC advances, vol.5, pp.86875-86884, 2015, doi:10.1039/C5RA16802C
26) Ali, M., Oshiki, M., Awata, T., Isobe, K., Kimura, Z., Yoshikawa, H., Hira, D., Kindaichi, T., Satoh, H., Fujii, T., Okabe, S., Physiological Characterization of Anaerobic Ammonium Oxidizing Bacterium 'Candidatus Jettenia caeni'. Environmental microbiology, vol.17, No.6, pp.2172-2189, 2015, doi: 10.1111/1462-2920.12674
25) Irisa, T., Hira, D., Furukawa, K., Fujii, T., Reduction of nitric oxide catalyzed by hydroxylamine oxidoreductase from an anammox bacterium. Journal of Bioscience and Bioengineering, vol.118, No.6, pp.616-621, 2014, doi: 10.1016/j.jbiosc.2014.05.018
24) 岡本裕行, 平大輔, 西山孝, 藤井隆夫, 古川憲治, “高機能anammoxリアクタに関する研究”, 化学工学論文集, vol.39, No.3，pp.197‒205, 2013, doi:10.1252/kakoronbunshu.39.197
23) Hira, D., Toh, H., Migita, C.T., Okubo, H., Nishiyama, T., Hattori, M., Furukawa, K.,・Fujii, T., Anammox organism KSU-1 expresses a NirK-type copper-containing nitrite reductase instead of a NirS-type with cytochrome cd1. FEBS Letters, vol.586, No.11, pp.1658-1663, 2012, doi: 10.1016/j.febslet.2012.04.041
22) Phan, T., Nguyen, P., Bui, X., Hira, D., Furukawa, K., Study on the application of anammox process using polyester non-woven biomass carrier reactor (PNBCR) for latex processing wastewater treatment. Journal of Water and Environment Technology, vol.10, No.2, pp.217-227, 2012, doi: 10.2965/jwet.2012.217
21) Zhang, L., Jiang, J., Yang, J., Hira, D., Furukawa, K., High rate nitrogen removal by the CANON process at ambient temperature. Water Science Technology, vol.65, No.10, pp.1826-1833, 2012, doi: 10.2166/wst.2012.870
20) Khanh, D., Quan, L., Zhang, W., Hira, D., Furukawa, K., Effect of temperature on low-strength wastewater treatment by UASB reactor using poly(vinyl alcohol)-gel carrier, Bioresource Technology, vol.102, No.24, pp.11147-11154, 2011, doi: 10.1016/j.biortech.2011.09.108
19) Quan, L., Khanh, D., Hira, D., Fujii, T., Furukawa, K., Reject water treatment by improvement of whole cell anammox entrapment using polyvinyl alcohol/alginate gel. Biodegradation, vol.22, No.6, pp.1155-1167, 2011, doi: 10.1007/s10532-011-9471-3
18) Li, Z., Hira, D., Fujii, T., Furukawa, K., Treatment capability and microbial community of anammox process using PVA gel beads as biomass carriers. Japanese Journal of Water Treatment Biology, vol.47, No.4, pp.137-145, 2011
17) Ma, Y., Hira, D., Li, Z., Chen, C., Furukawa, K., Nitrogen removal performance of a hybrid anammox reactor. Bioresource Technology, vol.102, No.12, pp.6650-6656, 2011, doi: 10.1016/j.biortech.2011.03.081
16) Li, Z., Ma, Y., Hira, D., Fujii, T., Furukawa, K., Factors affecting the treatment of reject water by the anammox process. Bioresource Technology, vol.102, No.10, pp.5702-5708, 2011, doi: 10.1016/j.biortech.2011.03.001
15) Zhang, L., Yang, J., Hira, D., Fujii, T., Zhang, W., Furukawa, K., High-rate nitrogen removal from anaerobic digester liquor using an up-flow anammox reactor with polyethylene sponge as a biomass carrier. Journal of Bioscience and Bioengineering, vol.111, No.3, pp.306-311, 2011, doi: 10.1016/j.jbiosc.2010.10.010
14) Yamamoto, T., Wakamatsu, S., Qiao, S., Hira, D., Fujii, T., Furukawa, K., Partial nitritation and anammox of a livestock manure digester liquor and analysis of its microbial community. Bioresource Technology, vol.102, No.3, pp.2342-2347, 2011, doi: 10.1016/j.biortech.2010.10.091
13) Yang, J., Zhang, L., Hira, D., Fukuzaki, Y, Furukawa, K., Anammox treatment of high-salinity wastewater at ambient temperature. Bioresource Technology, vol.102, No.3, pp.2367-2372, 2011, doi: 10.1016/j.biortech.2010.10.101
12) Zhang, L., Yang, J., Hira, D., Fujii, T., Furukawa, K., High-rate partial nitrification treatment of reject water as a pretreatment for anaerobic ammonium oxidation (anammox). Bioresource Technology, vol.102, No.4, pp.3761-3767, 2011, doi: 10.1016/j.biortech.2010.12.008
11) Yang, J., Zhang, L., Hira, D., Sato, T., Furukawa, K., High-rate nitrogen removal by the anammox process at ambient temperature. Bioresource Technology, vol.102, No.2, pp.672-676, 2011, doi: 10.1016/j.biortech.2010.08.039
10) Yang, J., Zhang, L., Fukuzaki, Y., Hira, D., Furukawa, K., High-rate nitrogen removal by the anammox process with a sufficient inorganic carbon source. Bioresource Technology, vol.101, No.24, pp.9471-9478, 2010, doi: 10.1016/j.biortech.2010.07.087
9) Fujii, T., Ukita, S., Hira, D., Kawase, T., Nishiyama, T., Migita, T., Furukawa, K., A heterodimeric c-type cytochrome c complex with very low redox potential from an anaerobic ammonium-oxidizing enrichment culture. FEMS Microbiological Letters, vol.313, No.1, pp.61-67, 2010
8) Yang, J., Zhang, L., Hira, D., Sato, T., Ma, Y., Li, Z., Furukawa, K., High rate partial nitrification treatment of reject wastewater. Journal of Bioscience and Bioengineering, vol.110, No.4, pp.436-440, 2010, doi: 10.1016/j.jbiosc.2010.05.003
7) Li, Z., Ma, Y., Zhang, L., Yang, J., Hira, D., Fujii, T., Furukawa, K., Characteristics of anammox granular sludge in a stirred tank reactor. Japanese Journal of Water Treatment Biology, vol.46, No.3, pp.145-153, 2010
6) Nojiri, M., Shirota, F., Hira, D., Suzuki, S., Expression, purification, crystallization and preliminary X-ray diffraction analysis of the soluble domain of PPA 0092, a putative nitrite reductase from Propionibacterium acnes. Acta Crystallographica Section F, vol.65, pp.123-127, 2009
5) Hira, D., Nojiri, M., Suzuki, S., Crystallization and preliminary X-ray diffraction analysis of a complex between electron-transfer partners, hexameric Cu-containing nitrite reductase and pseudoazurin. Acta Crystallographica Section F, vol.65, pp.116-119, 2009
4) Hira, D., Nojiri, M., Suzuki, S., Atomic resolution structure of pseudoazurin from the methylotrophic denitrifying bacterium Hyphomicrobium denitrificans: structural insights into its spectroscopic properties. Acta Crystallographica Section D, vol.65, pp.85-92, 2009
3) Hira, D., Nojiri, M., Yamaguchi, K., Suzuki, S., Identification of a blue copper protein from Hyphomicrobium denitrificans and its functions in the periplasm. Journal of Biochemistry, vol.142, No.3, pp.335-341, 2007
2) Nojiri, M., Hira, D., Yamaguchi, K., Okajima, T., Tanizawa, K., Suzuki, S., Crystal structures of cytochrome cL and methanol dehydrogenase from Hyphomicrobium denitrificans: Structural and mechanistic insights into interaction between the two proteins. Biochemistry, vol.45, No.11, pp.3481-3492, 2006
1) Nojiri, M., Hira, D., Yamaguchi, K., Okajima, T., Tanizawa, K., Suzuki, S., Preparation and characterization of Ca2＋-free methanol dehydrogenase from Hyphomicrobium denitrificans A3151. Chemistry Letters, vol.34, No.7, pp.1036-1037, 2005
◆Proceedings(国際会議 査読付)◆
14) Hira, D., Yamagiwa, Y., Aiko N., Fujikawa, Y., Furukawa, K., Fujii, T., Microbial community analysis of anammox and associated processes. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
13) Fujikawa, Y., Hira, D., Suzuki, I., Hung, P.D., Fujii, T., Kokubun, K., Furukawa, K., Microbiome analysis of samples from a single stage partial nitritation-anammox reactor used for treatment of groundwater. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
12) Fujikawa, Y., Hung P.D., Hira, D., Fujii, T., Ozaki, H., Furukawa, K., Performance of a 500 L SNAP reactor placed in the downstream of biological filtration system for removal of arsenic from groundwater. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
11) Akagi, T., Yamagiwa, Y., Hira, D., Aiko, N., Furukawa, K., Construction of SNAP reactor using attached biomass on acrylic pile fabrics installed in reservoir leachate at sea-based landfill sites. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
10) Yamagiwa, Y., Akagi, T., Hira, D., Furukawa, K., Nitrogen removal from low strength ammonium containing wastewater by SNAP process using acrylic pile fabrics as biomass carrier. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
9) Aiko, N., Yamagiwa, Y., Hira, D., Suwa, Y., Accumulation of anammox sludge from leachate of adjustment reservoir of controlled final landfill site. Proceedings of the 4th International Anammox Symposium (IANAS2019), Osaka, Japan, 2019
8) Hira, D., Matsumura, M., Furukawa, K., Fujii, T., Structure and function of copper-containing nitrite reductase and its electron donor protein from the anammox bacterium KSU-1, Proceedings of The Third International Anammox Symposium, 56-57, Dailian, China, 2015
7) Fujii, T., Hira, D., Furukawa, K., Identification and characterization of two c-type cytochromes from the anammox bacterium strain KSU-1, Proceedings of The Third International Anammox Symposium, 25-26, Dailian, China , 2015
6) Fujikawa, Y., Hung, P.D., Hira, D., Fujii, T., Ozaki, H., Furukawa. K., Potable water treatment of groundwater in Vietnam by a single stage ammonium removal using anammox process, Proceedings of The Third International Anammox Symposium, 87-88, Dailian, China , 2015
5) Aiko, N., Yabuki, Y., Hira, D., Nakamura, T., Suwa, Y., Effect of nitrate addition of anammox activities in sediment from the bottom of leachate adjustment reservoir of controlled final landfill site, Proceedings of The Third International Anammox Symposium, 128-129, Dailian, China , 2015
4) Fujii, T., Hira, D., Nishiyama, T., Furukawa, K., Re-characterization of hydroxylamine oxidoreductase of anammox bacteria, Proceedings of The Second International Anammox Symposium, 61-62, Seoul, Korea , 2013
3) Hira, D., Okubo, H., Ichikawa, S., Furukawa, K., Fujii, T., Hydrazine synthase from an Anammox Bacterium Strain KSU-1, Proceedings of The Second International Anammox Symposium, 65-66, Seoul, Korea, 2013
2) Hira, D., Nakamura, T., Yamagata, Y., Fujii, T., Furukawa, K., Structural analyses of a heterodimeric cytochrome c complex from a anammox bacterium strain KSU-1, The First International Anammox Symposium, 289-296, Kumamto, Japan, 2011
1) Fujii, T., Hira, D., Nishiyama, T., Furukawa, K., Heme- proteins expressed in soluble fraction in cells of anammox bacteria, The First International Anammox Symposium, 273-280, Kumamto, Japan, 2011